tiistai 18. helmikuuta 2014

Kaksi moottoria: 2. bakteerimoottori


Bakteerin flagellum fyysinen mallinnus 3D printterillä
Brandeis yliopisto, Wisconsin
kuva wikimedia
Bakteereilla on erilaisia moottoreita. E-koli esimerkiksi on varustettu nopeasti pyörivällä piiskalla (flagellum), jota pyörittää sen tyvessä oleva proteiinimoottori.

Annan asiantuntijoiden kertoa:
Rakenne
The bacterial flagellum is made up of the protein flagellin. Its shape is a 20 nanometer-thick hollow tube. It is helical and has a sharp bend just outside the outer membrane; this "hook" allows the axis of the helix to point directly away from the cell. A shaft runs between the hook and the basal body, passing through protein rings in the cell's membrane that act as bearings.
Gram-positive organisms have 2 of these basal body rings, one in the peptidoglycan layer and one in the plasma membrane.
Gram-negative organisms have 4 such rings: the L ring associates with thelipopolysaccharides, the P ring associates with peptidoglycan layer, the M ring is embedded in the plasma membrane, and the S ring is directly attached to the plasma membrane. The filament ends with a capping protein.
wikipedia



Moottori
The bacterial flagellum is driven by a rotary engine (the Mot complex) made up of protein, located at the flagellum's anchor point on the inner cell membrane. The engine is powered by proton motive force, i.e., by the flow of protons (hydrogen ions) across the bacterial cell membrane due to a concentration gradient set up by the cell's metabolism (in Vibrio species there are two kinds of flagella, lateral and polar, and some are driven by a sodium ion pump rather than a proton pump). The rotor transports protons across the membrane, and is turned in the process. The rotor alone can operate at 6,000 to 17,000 rpm, but with the flagellar filament attached usually only reaches 200 to 1000 rpm. The direction of rotation can be switched almost instantaneously, caused by a slight change in the position of a protein, FliG, in the rotor.

The cylindrical shape of flagella is suited to locomotion of microscopic organisms; these organisms operate at a low Reynolds number, where the viscosity of the surrounding water is much more important than its mass or inertia.

The rotational speed of flagella varies in response to the intensity of the proton motive force, thereby permitting certain forms of speed control, and also permitting some types of bacteria to attain remarkable speeds in proportion to their size; some achieve roughly 60 cell lengths / second. Although at such a speed it would take a bacterium about 245 days to cover a kilometre, and although that may seem slow, the perspective changes when the concept of scale is introduced. In comparison to macroscopic life forms it is very fast indeed when expressed in terms of number of body lengths per second. A cheetah for example, only achieves about 25 body lengths / sec.

Through use of their flagella, E. coli are able to move rapidly towards attractants and away from repellents. They do this by means of a biased random walk, with 'runs' and 'tumbles' brought about by rotating the flagellum counterclockwise and clockwise respectively.
wikipedia
Kokoaminen
During flagellar assembly, components of the flagellum pass through the hollow cores of the basal body and the nascent filament. During assembly, protein components are added at the flagellar tip rather than at the base. In vitro, flagellar filaments assemble spontaneously in a solution containing purified flagellin as the sole protein.
Lue koko flagellum artikkeli viitteineen ja lähteineen wikipediasta, tähän olen lainannut vain osa siitä.

1 kommentti:

  1. Tämähän olikin hyvä veto, ottaa tämä flegellum tarkasteluun! Youtubesta löysin myös 'elävää kuvaa' ja animaatiota http://www.youtube.com/watch?v=Ey7Emmddf7Y

    VastaaPoista